Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825851.1_cds_XP_016502476.1_16113
CDS Infomation

[gene=LOC107820666] [db_xref=GeneID:107820666] [protein=coiled-coil domain-containing protein 18-like isoform X2] [protein_id=XP_016502476.1] [location=complement(join(50165..50660,50751..50821,51361..51454,51535..51602,51692..51758,51926..52056,52193..52300,53316..53381,53736..53802,55696..55772,57062..57172,58089..58200,59085..59158,60712..60808,60940..60992,61363..61458,61868..62077,69821..69967))] [gbkey=CDS]
Sequence

ATGTCGTGGTTGAGATCAGCCATGAATAAAGCGGTGGAGGTTGGGAATAACAACCTCACA
CGCACTGTTAAGAACTACGCCGACTCCGTCGTTCAACACGCCGGTCACGCAGTTGCCGAG
GGCGCTAAAATCTTACAGGATCGCATTGGGAATAGGAACTTCAAAAGCTTTAAACAGACG
GTCCAAAGATTGGAAGAGGCTTCTAGTTCTTGCAAGGGACCAGAGAGAGTTCAGTTGATG
AAAAGGTGGTTAGCTGCACTTAAGGCAATTGATAACATGTTTGAGGTTTCTGTTGAAGAT
AAAGAGAAGAACAACGAGCAGCAGCATTCTTCTGAGGAACCAAGAAAACAATCACTGGTT
CTCTATTATGATTCTGAGATGGGTGGTGAGCCACTGAACTTTCGTGATGTCTTTCTTTAC
AGTAAAGCTTTGGAGGGCATATCAATTTGTATGATTCTTGAAACGCCAAATGAAGAGGAA
ATCTCTCTCCTCCTTGAATTATTTGGACTCTGTCTCACTGGAGGAAAAGCGGTTCACAAT
GCAATAGTCGGCAGCATCCAGGATCTGGCAAAAGCTTTCTCAAGCTACAAAGATGAAGTA
TTGGTAAAACGTGAGGAGCTATTGCAGTTTGCAGAAAGTGCCATCACAGGGTTGAAAATT
AACGCAGATCTTGGAAGAATTGATGCTGAAGTCTCCACATTGAATAAACAACTTGAAGAA
ATAAAAACAGTAAAGGATGCAAGTGAGGGTCATGAAACAATTTCCAAGGAGACTGCTGCT
TCAATAGAGGCTCTGAAAGCGGCACTCGCACATATTAGAGTCTGCTCCAGATTAGAAGGG
CTTCTACTGAAGAAAAAAACTCTTAAATATGGGGACTCTCCAGAAGTTCATTCTCAAAAG
GTTGATAAGTTGAAACTCTTATCTGAATCTCTTGCTAGCTCCACCAACAAAGCTGAAACG
GAGATCTCAGATCACAGAGTTCAGAAAGAGGAAGCACTAAAATTTCGTGTTGCCAAGACC
GGTGAAGTTGGTGAAGTAGAGAAGGAATTAGCAGCCGAGATTTCAGCTCTGGAGAAACAA
AGGAACGAGATTGAAGCTCAATTGAAACAGGTCAATATCTCCTTGGCAGCAGCTAGTGCG
CGCCTTCAGAATGTCCGAGAAGAGAGGGACCAATTCTATGACGCTAATGATGAGATTGTT
GCTCATCTAAAAACTAGAGAAGACGAGCTATCAAAGTCCATTGGCTCATGTAGAGTGGAA
GCAGATGTTCTTAGTTCGTGGATCAAGTTTTTGGAGGACGCTTGGGCTCTTCAGTCCTCT
TTTACAGAGACCAAAGAGAAGGAGGCCAACGTTGAATTGGAAAGGCATGAAGATTATTTT
GTGAACTTGGTCTTGAAACTTCTCTCTGCTTACGAGAAAGAGTTGAGGCCTTCTGTTGAT
CGTATTAGAAAATATGTGGAGAACTTAAAGAGTTTAGGTGAAGGCTCAGCAGAAGAATCT
GGTCTGGTTTCTGGGGAATCAAAAGCATTGATCCCTAGGAAAAATCTGGAGTTGGAGTAC
CTGGACTATGAAGCTAAGATTATCACCACCTTCAGTGTAGTCGACAACATGATGGAACAG
TTTTATGCTCAACAAGGGAAAGTGTCCAGGAAAGATGAGCCAACGATTAAAGAGCTGTTT
GAGAACATTGAAAAGTTACGAGAAGAATTTGAGTCTATTGAGAGGCCAGAACTGGAAATG
GAGGTCCCGGAGGTCCCTACCCAAGAGGACGCTTCATCCCATAAAATTCCTGATGAAAGT
ACACATACTGCAAAGAAGGCAACAGAAGCCCCTGCAACTGCAACTTCTACCAAACCGGAG
CAGGTATCTGATGCCCCATCCTATAAAATGCTAGATGAAAGTGTATCAATTCCTGCGAGG
GAGGCAACAGAAGCCCCTGCAGCTGGGGAAAAGGAGGAAAAGAAACCAGCTGCTACTAAA
GCCGTGCAGGTGTCTGAAGCAGAGTTGGCAAAATTGGAATCTGAATCTGAAAACATTAAC
CAGGATTACTCAGCAGAAGAGATTGGTGGCTGGGAATTTGATGAGCTGGAAAAAGAGTTA
AATCTTGGGGACTCGGGCAAACCTCAGAAAGATAGAAACACCTAA

Peptide Sequence

PEP ID

XP_016502476.1
PEP Infomation

PREDICTED: coiled-coil domain-containing protein 18-like isoform X2 [Nicotiana tabacum]
Sequence

MSWLRSAMNKAVEVGNNNLTRTVKNYADSVVQHAGHAVAEGAKILQDRIGNRNFKSFKQT
VQRLEEASSSCKGPERVQLMKRWLAALKAIDNMFEVSVEDKEKNNEQQHSSEEPRKQSLV
LYYDSEMGGEPLNFRDVFLYSKALEGISICMILETPNEEEISLLLELFGLCLTGGKAVHN
AIVGSIQDLAKAFSSYKDEVLVKREELLQFAESAITGLKINADLGRIDAEVSTLNKQLEE
IKTVKDASEGHETISKETAASIEALKAALAHIRVCSRLEGLLLKKKTLKYGDSPEVHSQK
VDKLKLLSESLASSTNKAETEISDHRVQKEEALKFRVAKTGEVGEVEKELAAEISALEKQ
RNEIEAQLKQVNISLAAASARLQNVREERDQFYDANDEIVAHLKTREDELSKSIGSCRVE
ADVLSSWIKFLEDAWALQSSFTETKEKEANVELERHEDYFVNLVLKLLSAYEKELRPSVD
RIRKYVENLKSLGEGSAEESGLVSGESKALIPRKNLELEYLDYEAKIITTFSVVDNMMEQ
FYAQQGKVSRKDEPTIKELFENIEKLREEFESIERPELEMEVPEVPTQEDASSHKIPDES
THTAKKATEAPATATSTKPEQVSDAPSYKMLDESVSIPAREATEAPAAGEKEEKKPAATK
AVQVSEAELAKLESESENINQDYSAEEIGGWEFDELEKELNLGDSGKPQKDRNT

Transcript Sequence

Gene sequence data has not been registered.